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8th International Conference on Bio-inspired Information and Communications Technologies (formerly BIONETICS)

Research Article

Multiscale System Modeling of Biochemical Pathways

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  • @INPROCEEDINGS{10.4108/icst.bict.2014.258008,
        author={Krishnendu Ghosh},
        title={Multiscale System Modeling of Biochemical Pathways},
        proceedings={8th International Conference on Bio-inspired Information and Communications Technologies (formerly BIONETICS)},
        publisher={ICST},
        proceedings_a={BICT},
        year={2015},
        month={2},
        keywords={formal modeling systems biology model checking algorithms},
        doi={10.4108/icst.bict.2014.258008}
    }
    
  • Krishnendu Ghosh
    Year: 2015
    Multiscale System Modeling of Biochemical Pathways
    BICT
    ACM
    DOI: 10.4108/icst.bict.2014.258008
Krishnendu Ghosh,*
    *Contact email: ghoshk@miamioh.edu

    Abstract

    Querying by temporal logic as a reasoning mechanism on a system representing multiscale processes is important in understanding the details of multiscale processes, in particular in models of biochemical pathways. A novel formalism representing a system of multiscale biochemical pathways is described. The definitions of multiscale model in discrete domains are represented in the form of a labeled transition system. A polynomial time algorithm is constructed for
    identification of systems representing multiscale pathways

    Keywords
    formal modeling, systems biology, model checking, algorithms
    Published
    2015-02-02
    Publisher
    ICST
    Appears in
    ACM Digital Library
    http://dx.doi.org/10.4108/icst.bict.2014.258008
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