Towards an open online repository of P. polycephalum networks and their corresponding graph representations

Michael Dirnberger; Tim Kehl; Tim Mehlhorn; Kurt Mehlhorn; Adrian Neumann

The First International Workshop on Physarum Transport Networks

Research Article

Towards an open online repository of P. polycephalum networks and their corresponding graph representations

Cite: BibTeX Plain Text

@INPROCEEDINGS{10.4108/eai.3-12-2015.2262469,
    author={Michael Dirnberger and Tim Kehl and Tim Mehlhorn and Kurt Mehlhorn and Adrian Neumann},
    title={Towards an open online repository of P. polycephalum networks and their corresponding graph representations},
    proceedings={The First International Workshop on Physarum Transport Networks},
    publisher={ACM},
    proceedings_a={PHYSNET},
    year={2016},
    month={5},
    keywords={p polycephalum experimental data graphs},
    doi={10.4108/eai.3-12-2015.2262469}
}

Michael Dirnberger
Tim Kehl
Tim Mehlhorn
Kurt Mehlhorn
Adrian Neumann
Year: 2016
Towards an open online repository of P. polycephalum networks and their corresponding graph representations
PHYSNET
ACM
DOI: 10.4108/eai.3-12-2015.2262469

Michael Dirnberger¹^,*, Tim Kehl¹, Tim Mehlhorn², Kurt Mehlhorn¹, Adrian Neumann¹

1: Max Planck Institute for Informatics
2: Korea Institute of Technology Europe

*Contact email: mtd@mpi-inf.mpg.de

Abstract

We introduce the Slime Mold Graph Repository, a publicly available collection of pairs (I, G). Let I denote an image of P. polycephalum's signature network and G an equivalent weighted graph representation of I. To convert I to G we have developed a dedicated software called NEFI. Working with graphs makes data analysis using techniques from graph theory and network science straight-forward.

Keywords: p polycephalum experimental data graphs

Published: 2016-05-24
Publisher: ACM

: http://dx.doi.org/10.4108/eai.3-12-2015.2262469