The First International Workshop on Physarum Transport Networks

Research Article

Towards an open online repository of P. polycephalum networks and their corresponding graph representations

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BibTeX Plain Text
  • @INPROCEEDINGS{10.4108/eai.3-12-2015.2262469,
    author={Michael Dirnberger and Tim Kehl and Tim Mehlhorn and Kurt Mehlhorn and Adrian Neumann},
    title={Towards an open online repository of P. polycephalum networks and their corresponding graph representations},
    proceedings={The First International Workshop on Physarum Transport Networks},
    publisher={ACM},
    proceedings_a={PHYSNET},
    year={2016},
    month={5},
    keywords={p polycephalum experimental data graphs},
    doi={10.4108/eai.3-12-2015.2262469}
}
  • Michael Dirnberger
    Tim Kehl
    Tim Mehlhorn
    Kurt Mehlhorn
    Adrian Neumann
    Year: 2016
    Towards an open online repository of P. polycephalum networks and their corresponding graph representations
    PHYSNET
    ACM
    DOI: 10.4108/eai.3-12-2015.2262469
Michael Dirnberger1,*, Tim Kehl1, Tim Mehlhorn2, Kurt Mehlhorn1, Adrian Neumann1
  • 1: Max Planck Institute for Informatics
  • 2: Korea Institute of Technology Europe
*Contact email: mtd@mpi-inf.mpg.de

Abstract

We introduce the Slime Mold Graph Repository, a publicly available collection of pairs (I, G). Let I denote an image of P. polycephalum's signature network and G an equivalent weighted graph representation of I. To convert I to G we have developed a dedicated software called NEFI. Working with graphs makes data analysis using techniques from graph theory and network science straight-forward.

Keywords
p polycephalum experimental data graphs
Published
2016-05-24
Publisher
ACM
http://dx.doi.org/10.4108/eai.3-12-2015.2262469
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