Research Article
A noise-driven mechanism for adaptive growth rate regulation
@INPROCEEDINGS{10.4108/ICST.BIONETICS2008.4722, author={Chikara Furusawa and Kunihiko Kaneko and HIroshi Shimizu}, title={A noise-driven mechanism for adaptive growth rate regulation}, proceedings={1st International ICST Workshop on Technologies for Ambient Information Society}, publisher={ACM}, proceedings_a={TAIS}, year={2010}, month={5}, keywords={Gene Network Noise Growth Rate Regulation}, doi={10.4108/ICST.BIONETICS2008.4722} }
- Chikara Furusawa
Kunihiko Kaneko
HIroshi Shimizu
Year: 2010
A noise-driven mechanism for adaptive growth rate regulation
TAIS
ICST
DOI: 10.4108/ICST.BIONETICS2008.4722
Abstract
How can a microorganism adapt to a variety of environmental conditions despite there exists a limited number of signal transduction mechanisms? We show that for any growing cells whose gene expression fluctuate stochastically, adaptive cellular state is inevitably selected by noise, even without specific signal transduction network for it. In general, changes in protein concentration in a cell are given by its synthesis minus dilution and degradation, both of which are proportional to the rate of cell growth. In an adaptive state with a higher growth speed, both terms are large and balanced. Under the presence of noise in gene expression, the adaptive state is less affected by stochasticity since both the synthesis and dilution terms are large, while for a non-adaptive state both the terms are smaller so that cells are easily kicked out of the original state by noise. Hence, escape time from a cellular state and the cellular growth rate are negatively correlated. This leads to a selection of adaptive states with higher growth rates, and model simulations confirm this selection to take place in general. The results suggest a general form of adaptation that has never been brought to light - a process that requires no specific mechanisms for sensory adaptation. The result here provides a clue to understand flexible adaptation process in a cell, and also may provide a novel control mechanism useful in the field of engineering.