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Wireless Mobile Communication and Healthcare. 11th EAI International Conference, MobiHealth 2022, Virtual Event, November 30 – December 2, 2022, Proceedings

Research Article

Evaluating Rotation Invariant Strategies for Mitosis Detection Through YOLO Algorithms

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  • @INPROCEEDINGS{10.1007/978-3-031-32029-3_3,
        author={Dibet Garcia Gonzalez and Jo\"{a}o Carias and Yusbel Ch\^{a}vez Castilla and Jos\^{e} Rodrigues and Telmo Ad\"{a}o and Rui Jesus and Lu\^{\i}s Gonzaga Mendes Magalh\"{a}es and Vitor Manuel Leit\"{a}o de Sousa and Lina Carvalho and Rui Almeida and Ant\^{o}nio Cunha},
        title={Evaluating Rotation Invariant Strategies for Mitosis Detection Through YOLO Algorithms},
        proceedings={Wireless Mobile Communication and Healthcare. 11th EAI International Conference, MobiHealth 2022, Virtual Event, November 30 -- December 2, 2022, Proceedings},
        proceedings_a={MOBIHEALTH},
        year={2023},
        month={5},
        keywords={Rotation invariance deep learning YOLO mitosis counting},
        doi={10.1007/978-3-031-32029-3_3}
    }
    
  • Dibet Garcia Gonzalez
    João Carias
    Yusbel Chávez Castilla
    José Rodrigues
    Telmo Adão
    Rui Jesus
    Luís Gonzaga Mendes Magalhães
    Vitor Manuel Leitão de Sousa
    Lina Carvalho
    Rui Almeida
    António Cunha
    Year: 2023
    Evaluating Rotation Invariant Strategies for Mitosis Detection Through YOLO Algorithms
    MOBIHEALTH
    Springer
    DOI: 10.1007/978-3-031-32029-3_3
Dibet Garcia Gonzalez,*, João Carias, Yusbel Chávez Castilla, José Rodrigues, Telmo Adão, Rui Jesus1, Luís Gonzaga Mendes Magalhães2, Vitor Manuel Leitão de Sousa3, Lina Carvalho3, Rui Almeida3, António Cunha
  • 1: University of A Coruña
  • 2: Algoritmi Center
  • 3: Institute of Anatomical and Molecular Pathology, Faculty of Medicine
*Contact email: dibet.gonzalez@ccg.pt

Abstract

Cancer diagnosis is of major importance in the field of human medical pathology, wherein a cell division process known as mitosis constitutes a relevant biological pattern analyzed by professional experts, who seek for such occurrence in presence and number through visual observation of microscopic imagery. This is a time-consuming and exhausting task that can benefit from modern artificial intelligence approaches, namely those handling object detection through deep learning, from which YOLO can be highlighted as one of the most successful, and, as such, a good candidate for performing automatic mitoses detection. Considering that low sensibility for rotation/flip variations is of high importance to ensure mitosis deep detection robustness, in this work, we propose an offline augmentation procedure focusing rotation operations, to address the impact of lost/clipped mitoses induced by online augmentation. YOLOv4 and YOLOv5 were compared, using an augmented test dataset with an exhaustive set of rotation angles, to investigate their performance. YOLOv5 with a mixture of offline and online rotation augmentation methods presented the best averaged F1-score results over three runs.

Keywords
Rotation invariance deep learning YOLO mitosis counting
Published
2023-05-14
Appears in
SpringerLink
http://dx.doi.org/10.1007/978-3-031-32029-3_3
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