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Collaborative Computing: Networking, Applications and Worksharing. 17th EAI International Conference, CollaborateCom 2021, Virtual Event, October 16-18, 2021, Proceedings, Part I

Research Article

Semi-automatic Segmentation of Tissue Regions in Digital Histopathological Image

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  • @INPROCEEDINGS{10.1007/978-3-030-92635-9_39,
        author={Xin He and Kairun Chen and Mengning Yang},
        title={Semi-automatic Segmentation of Tissue Regions in Digital Histopathological Image},
        proceedings={Collaborative Computing: Networking, Applications and Worksharing. 17th EAI International Conference, CollaborateCom 2021, Virtual Event, October 16-18, 2021, Proceedings, Part I},
        proceedings_a={COLLABORATECOM},
        year={2022},
        month={1},
        keywords={Digital histopathological image Tissues segmentation Superpixels Deep convolutional neural network},
        doi={10.1007/978-3-030-92635-9_39}
    }
    
  • Xin He
    Kairun Chen
    Mengning Yang
    Year: 2022
    Semi-automatic Segmentation of Tissue Regions in Digital Histopathological Image
    COLLABORATECOM
    Springer
    DOI: 10.1007/978-3-030-92635-9_39
Xin He1, Kairun Chen2, Mengning Yang1,*
  • 1: School of Big Data and Software Engineering
  • 2: Chongqing Meehoo Technology Co.
*Contact email: mnyang@cqu.edu.cn

Abstract

Segmentation of tissue regions in the digital histopathological images refers to the identification and segmentation of tissues such as epithelium, glandular cavity, fibers, etc. Precise segmentation of tissues is key to pre-determining the regions with the greatest diagnostic value, which can support clinical diagnosis, particularly with regard to etiology and severity. In view of the uneven quality of histopathological images and the difficulty of manual segmentation. In this paper, an approach based on weakly supervised learning and deep learning has been proposed to build a semi-automatic segmentation model of tissue regions. The model uses superpixel classification to pre-segment the tissues, the tissue region boundary is preserved, and the automatic segmentation of the tissues is finally achieved based on the deep convolutional neural network. The effectiveness of the model is evaluated on 600 cervical histopathology images provided by the hospital. The results show that the proposed method achieves 82.52% mean IoU of epithelial segmentation and 81.67% mean IoU of glandular lumen segmentation in cervical histopathological images. The model is superior to traditional manual feature representation methods and classical deep convolution neural network methods in segmentation accuracy and efficiency.

Keywords
Digital histopathological image Tissues segmentation Superpixels Deep convolutional neural network
Published
2022-01-01
Appears in
SpringerLink
http://dx.doi.org/10.1007/978-3-030-92635-9_39
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